Protein Sequencing Protocols -- (1) (2)

 

From Wikibooks, the open-content textbooks collection

 

Background: Protein sequencing denotes the process of finding the primary structure, the amino acid composition, of a protein. Sequencing plays a very vital role in Proteomics as the information obtained can be used to deduce function, structure, and location which in turn aids in identifying new or novel proteins as well as understanding of cellular processes. Better understanding of these processes allows for creation of drugs that target specific metabolic pathways among other things. Though several methods exist to sequence proteins the two dominant methods are Mass Spectrometry and Edman Degradation. Other methods that are not as frequently used still can serve very specific roles, such as overcoming inadequacies or acting as a preliminary, that compliment the two predominant methods.

 

Contents

 

1 History

2 Sequencing Methods

2.1 N-terminal Residue Identification

2.2 Edman Degradation

2.3 Mass Spectrometry

2.3.1 Peptide Mass Fingerprinting

2.3.2 Tandem Mass Spectrometry

3 Citations

 

Other Protein Sequencing Protocols

 

Protein Sequencing Sample Preparation and General information

Protein Sequencing Sample Preparation and General information. Sample Amount ... The major difficulty in protein sequencing is sample preparation. The major ...
www.dartmouth.edu/~mbcf/protseqsmplprep.pdf

N-terminal Peptide Sequencing from SDS-PAGE Electroblots

logo. N-terminal Peptide Sequencing from SDS-PAGE Electroblots. This is a very useful procedure for characterizing proteins identified from SDS-PAGE gels. ...
www.encorbio.com/protocols/PVDF.htm

Amino Acid Sequences Can Be Determined by Automated Edman Degradation

Amino Acid Sequences Can Be Determined by Automated Edman Degradation The protein of interest having been purified and its mass determined, ...
www.ncbi.nlm.nih.gov/books/bv.fcgi?rid=stryer.section.483

Enzyme Research Proteomics - Home of Protein sequencing

Enzyme Research Proteomics is a provider of outsource services to the Pharmaceutical and Biotechnology industry.
www.enzymeproteomics.com/edman.htm

Protein Sequencing

Automated protein sequencing has evolved considerably with greater sensitivity, speed and ease of operation. Advances in mass spectrometry have now taken ...
www.lerner.ccf.org/services/molecbiotech/protein.php

Protein Sequencing

Protein Sequencing. Columns, Reagents & Software , Reagents , Software , Protein Sequencers , Protein Sequencers , Accessories , Spare Parts ...
https://products.appliedbiosystems.com/ab/en/US/adirect/ab?cmd=catNavigate2&catID=601192

N-terminal protein sequencing

If the amino terminus is blocked, the protein or peptide cannot be sequenced using Edman degradation. We perform de-blocking procedures and will discuss ...
www.protein.iastate.edu/nsequence494.html

Microfluidic Protein Sequencing

Herein is described novel means of protein sequencing via sequential terminal chemical degradation (1, 2). The essence and novelty of the invention is that ...
www.wbabin.net/saba/saba7.htm

Shotgun Protein Sequencing: Assembly of Peptide Tandem Mass ...

Indeed the powerful shotgun DNA sequencing strategies have not been extended to automated protein sequencing. We demonstrate, for the first time, ...
www.mcponline.org/cgi/content/abstract/6/7/1123

Protein Sequencing in the Post-Genomic Era -- Rajagopal and Ahern ...

Protein sequencing. Computational analysis uses tissue- or species-specific databases for each sequence determination. The isoelectric points (pIs) and the ...
www.sciencemag.org/cgi/content/full/sci;294/5551/2571

De Novo Peptide Sequencing, Table of Contents

Protease-catalyzed incorporation of 18O into peptide fragments and its application for protein sequencing by electrospray and matrix-assisted laser ...
www.ionsource.com/tutorial/DeNovo/references.htm

Protocols, Protein Sequencing, Research Technologies Branch, NIAID ...

Protocols for the Protein Sequencing Unit of the Research Technologies Branch.
www3.niaid.nih.gov/labs/aboutlabs/rtb/ProtChemSec/proteinSequencingUnit/protocols

 
 

Web Guider

Ch 1.General Lab Techniques

Ch 2.Molecular Separation

Ch 3.DNA and RNA

Ch 4.Genetics

Ch 5.PCR Serials

Ch 6.Protein

Ch 7.DNA Protein Interactions

Ch 8.Immunohistoch / immunology

Ch 9.Cellular Biology

Ch 10.GC/MS, NMR and Proteomics

Ch 11.Animal Experiments

Ch 12.Worm: C. Elegans

Ch 13.HPLC and TLC

Ch 14.Buffers formats in Lab.

Ch 15.Other Resources

Free eBooks at Library Online

Cinema Online,Free Movies-(1)

Progresses in Life Science

Free eBooks in biomedicine

Pathway databases

Biological Educational Resources

Textbooks and Lab Manuals

Lab-Manual.Com
Home || Biosocial || Videos || Recipes || Resource